![]() ![]() 7.26 How to RNA-Seq in CoGe in three minutes.7.25 How to load a private genome with annotations and experimental data, and view in JBrowse in under three minutes.7.24 How to load experimental data into CoGe.7.23 Using the iPlant Datastore to add your data to CoGe.7.22 Using user-data management system to share data.7.21 Using CoGe's tools SynFind and SynMap to find a mark a syntenic gene pair in a syntenic dotplot.coli and analyze a syntenic discontinuity in more detail with GEvo 7.20 Using CoGe's tool SynMap to compare two genomes of E.7.19 Using CoGe's tool SynFind to identify sytnenic regions across multiple genomes.7.18 Using CoGe's tools SynMap and GEvo to compare the genomes of two Phytophthora species.7.17 How to use the CoGe and SSWAP (iPlant's Semantic Web Portal: ).7.16 How to use the iPlant Data Store to generate a quick-share link to share a genome file.7.15 How to use CoGe's polymorphism tables for validating identified polymorphisms.7.14 How to generate orthology gene lists between maize and another grass (e.g.7.13 How to compare different assembly versions of a genome.7.12 How to visualize assembly and annotation changes between versions of the maize genome.7.11 How to verify and compare maize gene models.7.10 Comparing the chloroplast genomes of maize and sorghum.7.9 Using OrganismView and SynMap to find and compare closely related genomes.7.8 Using SynMap to compare two strains of Bacillus thuringiensis and characterizing the breakpoints of an inversion (which turns out to have a chance of being due to a genome assembly error.7.7 Using GEvo to find a genomic region of interest, and extracting its sequence and genomic features. ![]()
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